Computational Systems Biology
Sauro Lab
University of Washington
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What is SBW 
Research Impact 
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Software Downloads:

1. SBW
2. JDesigner
3. Jarnac
4. WinSCAMP
5. Matlab Interface
6. Optimization
6. Bifurcation
 
maintained by Frank Bergmann
 
 
 
 

SBW AutoLayout Features & Screenshots

SBW AutoLayout's interface showing a model that has an automatically generated layout:

:sbw:autolayout:al_interfacesquares.jpg

Gravity acts to pull together any disconnected parts of the network and magnetsim acts to keep the connection's products and reactants pointing in the appropriate direction:

:sbw:autolayout:al_interfacegravitymagnet.jpg

SBW AutoLayout also splays any loops or forks in a connection:

:sbw:autolayout:al_interfaceloopsforks.jpg

Nodes with many connections can be aliased so that each connection gets a copy of the node, which can greatly simplify the model's layout:

:sbw:autolayout:al_interfacealias.jpg

Nodes and connections can be locked so they will not be affected by future automatic layout generation:

:sbw:autolayout:al_interfacelocknodes.jpg

 
sbw/autolayout/features.txt · Last modified: 2006/12/06 01:02 (external edit)
 

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