Computational Systems Biology
Sauro Lab
University of Washington
Home  |   Downloads  |   News  |   Research  |   Papers  |   About Us  |   Contact Us  |   SBW Help   |   Jobs
     


What is SBW 
Research Impact 
Published Papers 
Lab Members 
Available Positions 
CSB Links 
Courses 
Student Projects 
 
 
 
Software Downloads:

1. SBW
2. JDesigner
3. Jarnac
4. WinSCAMP
5. Matlab Interface
6. Optimization
6. Bifurcation
 
maintained by Frank Bergmann
 
 
 
 

SBML Support (NOM)

SBML is a popular way to exchange computational models between tools. However, SBML is not a simple format to read. Given the frequency that SBML is read by simulation tools, SBW provides a module (NOM - network object model - based on Ben Bornsteins libSBML) that allows developers to easily incorporate SBML support into their own tools by providing an easy to use API. It also provides an easy means to move between infix (standard format in all simulators) and MathML (the standard format in SBML)

The figure below shows a screenshot from the SBW Inspector which shows some of the methods in the API.

:sbw:sbmlsupport:nom_main_600w.jpg

Installation

The SBML Support module is installed with SBW. For more information see the SBW installation page.

The SBML Support module is fully supported on Windows, Mac OS X, and Linux.

Documentation & Help

 
sbw/sbmlsupport.txt · Last modified: 2007/01/11 22:30 (external edit)
 

    Home  |   About Us  |   Contact Us  |   Statistics
Recent changes RSS feed Creative Commons License Donate Powered by PHP Valid XHTML 1.0 Valid CSS Driven by DokuWiki